3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00841

Details:

PFam ID : PF00841

PFam Domain Description : Sperm histone P2

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 13

Average sequence length: 85.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00841	E9HQZ3_DAPPU_1_59	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00841	PRM2_BOVIN_1_82	100

Sequence based PCA Plot of the family - PF00841 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay