3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF11546

Details:

PFam ID : PF11546

PFam Domain Description : Staphylococcal complement inhibitor SCIN

Number of Sequence in 50% Dataset : 6

Number of Sequence in Full Dataset : 13

Average sequence length: 97.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF11546	Q8NZK7_STRP8_29_180	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF11546	Q2YV49_STAAB_5_111	100

Sequence based PCA Plot of the family - PF11546 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay