3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09037

Details:

PFam ID : PF09037

PFam Domain Description : Stf0 sulphotransferase

Number of Sequence in 50% Dataset : 39

Number of Sequence in Full Dataset : 69

Average sequence length: 208.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09037	C6DJ11_PECCP_189_323	86.8

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09037	Q1ATK0_RUBXD_1_273	100

Sequence based PCA Plot of the family - PF09037 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=34 Length=8
Motif2 Start=25 Length=8
Motif3 Start=105 Length=8
Motif4 Start=8 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay