3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF04382

Details:

PFam ID : PF04382

PFam Domain Description : SAB domain

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 28

Average sequence length: 46.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF04382	B7WYI4_COMTE_1_67	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF04382	Q4SR26_TETNG_296_333	100

Sequence based PCA Plot of the family - PF04382 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay