3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09579

Details:

PFam ID : PF09579

PFam Domain Description : Sporulation protein YtfJ (Spore_YtfJ)

Number of Sequence in 50% Dataset : 39

Number of Sequence in Full Dataset : 219

Average sequence length: 84.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09579	D3M1X5_9ACTO_46_89	10.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09579	A6M0Z4_CLOB8_31_111	100

Sequence based PCA Plot of the family - PF09579 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=7 Length=39

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay