3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02865

Details:

PFam ID : PF02865

PFam Domain Description : STAT protein, protein interaction domain

Number of Sequence in 50% Dataset : 26

Number of Sequence in Full Dataset : 85

Average sequence length: 110.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02865	B3RME3_TRIAD_2_74	72

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02865	E4XUX2_OIKDI_64_190	100

Sequence based PCA Plot of the family - PF02865 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=10 Length=27
Motif2 Start=1 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay