3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF04267 Details: PFam ID : PF04267 PFam Domain Description : Sarcosine oxidase, delta subunit family Number of Sequence in 50% Dataset : 4 Number of Sequence in Full Dataset : 233 Average sequence length: 82.6 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF04267F1ZAF4_9SPHN_3_8166.6 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF04267Q1H464_METFK_3_82100 Sequence based PCA Plot of the family - PF04267 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 2 motifsMotif1 Start=1 Length=8Motif2 Start=14 Length=39 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF04267
PFam Domain Description : Sarcosine oxidase, delta subunit family
Number of Sequence in 50% Dataset : 4
Number of Sequence in Full Dataset : 233
Average sequence length: 82.6
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER