3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF01023

Details:

PFam ID : PF01023

PFam Domain Description : S-100/ICaBP type calcium binding domain

Number of Sequence in 50% Dataset : 12

Number of Sequence in Full Dataset : 199

Average sequence length: 42.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF01023	Q6X9X7_HORSE_11_39	36.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF01023	S10A7_HORSE_7_46	90.9

Sequence based PCA Plot of the family - PF01023 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=34 Length=8
Motif2 Start=9 Length=18

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay