3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06621

Details:

PFam ID : PF06621

PFam Domain Description : Single-minded protein C-terminus

Number of Sequence in 50% Dataset : 7

Number of Sequence in Full Dataset : 14

Average sequence length: 191.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06621	D2H5U2_AILME_358_525	66.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06621	A2T6G2_MACNE_1_50	100

Sequence based PCA Plot of the family - PF06621 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay