3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF05210

Details:

PFam ID : PF05210

PFam Domain Description : Sprouty protein (Spry)

Number of Sequence in 50% Dataset : 13

Number of Sequence in Full Dataset : 66

Average sequence length: 106.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05210	D2HTH3_AILME_239_327	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05210	F1L912_ASCSU_209_326	100

Sequence based PCA Plot of the family - PF05210 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=10 Length=11
Motif2 Start=1 Length=8
Motif3 Start=81 Length=8
Motif4 Start=65 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay