3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06686

Details:

PFam ID : PF06686

PFam Domain Description : Stage III sporulation protein AC/AD protein family

Number of Sequence in 50% Dataset : 46

Number of Sequence in Full Dataset : 334

Average sequence length: 57.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06686	F0HJ07_9FIRM_7_65	37.7

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06686	D7WW84_9BACI_5_62	93.0

Sequence based PCA Plot of the family - PF06686 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay