3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08175

Details:

PFam ID : PF08175

PFam Domain Description : Small acid-soluble spore protein O family

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 23

Average sequence length: 45.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08175	F2UMK0_9EUKA_664_848	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08175	C2WFX8_BACCE_2_41	95.4

Sequence based PCA Plot of the family - PF08175 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=7 Length=37

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay