3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02773

Details:

PFam ID : PF02773

PFam Domain Description : S-adenosylmethionine synthetase, C-terminal domain

Number of Sequence in 50% Dataset : 10

Number of Sequence in Full Dataset : 1010

Average sequence length: 135.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02773	F0V2T9_9MOLU_123_262	22.2

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02773	E5S4R3_TRISP_284_318	100

Sequence based PCA Plot of the family - PF02773 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=2 Length=8
Motif2 Start=26 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay