3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10325

Details:

PFam ID : PF10325

PFam Domain Description : Serpentine type 7TM GPCR chemoreceptor Srz

Number of Sequence in 50% Dataset : 194

Number of Sequence in Full Dataset : 265

Average sequence length: 213.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10325	E3LJE2_CAERE_362_654	92.7

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10325	A8X223_CAEBR_1_109	100

Sequence based PCA Plot of the family - PF10325 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=10 Length=27
Motif2 Start=1 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay