3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13845

Details:

PFam ID : PF13845

PFam Domain Description : Septum formation

Number of Sequence in 50% Dataset : 95

Number of Sequence in Full Dataset : 165

Average sequence length: 160.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13845	A5WG66_PSYWF_43_167	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13845	E7N7V8_9ACTO_35_187	100

Sequence based PCA Plot of the family - PF13845 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=10 Length=18
Motif2 Start=1 Length=8
Motif3 Start=49 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay