3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14292

Details:

PFam ID : PF14292

PFam Domain Description : SusE outer membrane protein

Number of Sequence in 50% Dataset : 84

Number of Sequence in Full Dataset : 134

Average sequence length: 119.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14292	D3ILJ0_9BACT_11_150	53.0

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14292	D3ILJ0_9BACT_11_150	100

Sequence based PCA Plot of the family - PF14292 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay