3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06443 Details: PFam ID : PF06443 PFam Domain Description : SEF14-like adhesin Number of Sequence in 50% Dataset : 6 Number of Sequence in Full Dataset : 9 Average sequence length: 115.7 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF06443A7FIY4_YERP3_12_79No suitable BRS could be identified HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF06443Q9X6U1_ECOLX_2_166100 Sequence based PCA Plot of the family - PF06443 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=19 Length=8Motif2 Start=10 Length=8Motif3 Start=1 Length=8Motif4 Start=115 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF06443
PFam Domain Description : SEF14-like adhesin
Number of Sequence in 50% Dataset : 6
Number of Sequence in Full Dataset : 9
Average sequence length: 115.7
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER