3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07709

Details:

PFam ID : PF07709

PFam Domain Description : Seven Residue Repeat

Number of Sequence in 50% Dataset : 35

Number of Sequence in Full Dataset : 35

Average sequence length: 13.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07709	E3T8Y8_9SAUR_1_48	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07709	Q7RKX3_PLAYO_419_432	29

Sequence based PCA Plot of the family - PF07709 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay