3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07744

Details:

PFam ID : PF07744

PFam Domain Description : SPOC domain

Number of Sequence in 50% Dataset : 63

Number of Sequence in Full Dataset : 208

Average sequence length: 111.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07744	E7EVH3_HUMAN_1023_1072	27.4

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07744	E3KC29_PUCGT_781_905	100

Sequence based PCA Plot of the family - PF07744 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=19 Length=8
Motif2 Start=10 Length=8
Motif3 Start=103 Length=11
Motif4 Start=1 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay