3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14098

Details:

PFam ID : PF14098

PFam Domain Description : Small, acid-soluble spore protein I

Number of Sequence in 50% Dataset : 5

Number of Sequence in Full Dataset : 38

Average sequence length: 63.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14098	B7DQX7_9BACL_7_187	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14098	D9RY04_THEOJ_4_68	100

Sequence based PCA Plot of the family - PF14098 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=19 Length=8
Motif2 Start=10 Length=8
Motif3 Start=1 Length=8
Motif4 Start=36 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay