3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00438 Details: PFam ID : PF00438 PFam Domain Description : S-adenosylmethionine synthetase, N-terminal domain Number of Sequence in 50% Dataset : 15 Number of Sequence in Full Dataset : 1098 Average sequence length: 98.1 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF00438D6T291_GARVA_1_6864.2 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF00438Q2LSR0_SYNAS_1_106100 Sequence based PCA Plot of the family - PF00438 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 2 motifsMotif1 Start=1 Length=18Motif2 Start=32 Length=18 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF00438
PFam Domain Description : S-adenosylmethionine synthetase, N-terminal domain
Number of Sequence in 50% Dataset : 15
Number of Sequence in Full Dataset : 1098
Average sequence length: 98.1
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER