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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00438
Details:

PFam ID : PF00438

PFam Domain Description : S-adenosylmethionine synthetase, N-terminal domain

Number of Sequence in 50% Dataset : 15

Number of Sequence in Full Dataset : 1098

Average sequence length: 98.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF00438D6T291_GARVA_1_6864.2
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF00438Q2LSR0_SYNAS_1_106100
Sequence based PCA Plot of the family - PF00438 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=18
Motif2 Start=32 Length=18
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay