3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10320

Details:

PFam ID : PF10320

PFam Domain Description : Serpentine type 7TM GPCR chemoreceptor Srsx

Number of Sequence in 50% Dataset : 80

Number of Sequence in Full Dataset : 195

Average sequence length: 195.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10320	E5SPA0_TRISP_35_246	63.2

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10320	F1PIJ1_CANFA_48_320	100

Sequence based PCA Plot of the family - PF10320 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay