3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14373

Details:

PFam ID : PF14373

PFam Domain Description : Superinfection immunity protein

Number of Sequence in 50% Dataset : 8

Number of Sequence in Full Dataset : 91

Average sequence length: 42.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14373	B8CGV6_SHEPW_9_51	57.1

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14373	E6QEA2_9ZZZZ_10_54	100

Sequence based PCA Plot of the family - PF14373 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=21

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay