3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00685

Details:

PFam ID : PF00685

PFam Domain Description : Sulfotransferase domain

Number of Sequence in 50% Dataset : 863

Number of Sequence in Full Dataset : 1970

Average sequence length: 227.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00685	B1XN24_SYNP2_1_122	94.4

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00685	D7G7A7_ECTSI_78_258	99.7

Sequence based PCA Plot of the family - PF00685 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=5 Length=8
Motif2 Start=113 Length=8
Motif3 Start=130 Length=8
Motif4 Start=30 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay