3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00763

Details:

PFam ID : PF00763

PFam Domain Description : Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain

Number of Sequence in 50% Dataset : 125

Number of Sequence in Full Dataset : 1644

Average sequence length: 115.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00763	Q55NZ3_CRYNE_76_205	93.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00763	Q55NZ3_CRYNE_76_205	100

Sequence based PCA Plot of the family - PF00763 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=2 Length=8
Motif2 Start=122 Length=8
Motif3 Start=31 Length=23
Motif4 Start=94 Length=14

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay