3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09034

Details:

PFam ID : PF09034

PFam Domain Description : TRADD, N-terminal domain

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 12

Average sequence length: 102.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09034	C3Z811_BRAFL_1_82	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09034	TRADD_XENLA_44_155	100

Sequence based PCA Plot of the family - PF09034 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay