3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09121

Details:

PFam ID : PF09121

PFam Domain Description : Tower

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 13

Average sequence length: 38.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09121	A9SSL1_PHYPA_290_434	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09121	A5A3F7_STRPU_3016_3057	100

Sequence based PCA Plot of the family - PF09121 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay