3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13146 Details: PFam ID : PF13146 PFam Domain Description : TRL-like protein family Number of Sequence in 50% Dataset : 24 Number of Sequence in Full Dataset : 38 Average sequence length: 76.6 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF13146B5NIV1_SALET_1_4726.0 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF13146Q8F645_LEPIN_26_112100 Sequence based PCA Plot of the family - PF13146 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=28 Length=8Motif2 Start=19 Length=8Motif3 Start=10 Length=8Motif4 Start=1 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF13146
PFam Domain Description : TRL-like protein family
Number of Sequence in 50% Dataset : 24
Number of Sequence in Full Dataset : 38
Average sequence length: 76.6
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER