3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07771

Details:

PFam ID : PF07771

PFam Domain Description : Tick salivary peptide group 1

Number of Sequence in 50% Dataset : 27

Number of Sequence in Full Dataset : 66

Average sequence length: 107.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07771	A6N9U6_ORNPR_1_111	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07771	B7P518_IXOSC_17_176	100

Sequence based PCA Plot of the family - PF07771 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=1 Length=8
Motif2 Start=50 Length=8
Motif3 Start=65 Length=8
Motif4 Start=34 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay