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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF04760
Details:

PFam ID : PF04760

PFam Domain Description : Translation initiation factor IF-2, N-terminal region

Number of Sequence in 50% Dataset : 62

Number of Sequence in Full Dataset : 1547

Average sequence length: 51.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF04760D7G6Y0_ECTSI_369_42068.8
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF04760D3PEG2_DEFDS_1_4990.4
Sequence based PCA Plot of the family - PF04760 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=1 Length=17
Motif2 Start=36 Length=8
Motif3 Start=46 Length=8
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay