3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13743 Details: PFam ID : PF13743 PFam Domain Description : Thioredoxin Number of Sequence in 50% Dataset : 59 Number of Sequence in Full Dataset : 159 Average sequence length: 180.2 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF13743D7N6A8_9FIRM_5_20479.3 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF13743E3R8Q9_9LACO_36_215100 Sequence based PCA Plot of the family - PF13743 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=62 Length=8Motif2 Start=30 Length=8Motif3 Start=91 Length=8Motif4 Start=16 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF13743
PFam Domain Description : Thioredoxin
Number of Sequence in 50% Dataset : 59
Number of Sequence in Full Dataset : 159
Average sequence length: 180.2
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER