3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07811

Details:

PFam ID : PF07811

PFam Domain Description : TadE-like protein

Number of Sequence in 50% Dataset : 155

Number of Sequence in Full Dataset : 983

Average sequence length: 42.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07811	A9V6B0_MONBE_517_571	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07811	F2ARW0_RHOBA_33_75	93.6

Sequence based PCA Plot of the family - PF07811 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=5 Length=39

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay