3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07519

Details:

PFam ID : PF07519

PFam Domain Description : Tannase and feruloyl esterase

Number of Sequence in 50% Dataset : 161

Number of Sequence in Full Dataset : 393

Average sequence length: 383.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07519	E3J833_FRASU_65_570	92.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07519	Q0RIH1_FRAAA_68_212	100

Sequence based PCA Plot of the family - PF07519 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=424 Length=8
Motif2 Start=144 Length=8
Motif3 Start=14 Length=14
Motif4 Start=480 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay