3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13940 Details: PFam ID : PF13940 PFam Domain Description : Toxin Ldr, type I toxin-antitoxin system Number of Sequence in 50% Dataset : 2 Number of Sequence in Full Dataset : 14 Average sequence length: 32 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF13940A2BJR0_HYPBU_14_102No suitable BRS could be identified HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF13940E9WRY0_ECOLX_10_39100 Sequence based PCA Plot of the family - PF13940 : BRP of Green color is by FASSM and of Red color is by HMMER Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF13940
PFam Domain Description : Toxin Ldr, type I toxin-antitoxin system
Number of Sequence in 50% Dataset : 2
Number of Sequence in Full Dataset : 14
Average sequence length: 32
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER