3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07569

Details:

PFam ID : PF07569

PFam Domain Description : TUP1-like enhancer of split

Number of Sequence in 50% Dataset : 65

Number of Sequence in Full Dataset : 143

Average sequence length: 186.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07569	C5X5X7_SORBI_1_67	95.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07569	HIR2_CANGA_699_934	100

Sequence based PCA Plot of the family - PF07569 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=40

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay