3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02135

Details:

PFam ID : PF02135

PFam Domain Description : TAZ zinc finger

Number of Sequence in 50% Dataset : 63

Number of Sequence in Full Dataset : 206

Average sequence length: 77.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02135	B8BQM1_THAPS_539_632	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02135	B6SMS2_MAIZE_231_285	99.0

Sequence based PCA Plot of the family - PF02135 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=20

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay