3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF12845

Details:

PFam ID : PF12845

PFam Domain Description : TBD domain

Number of Sequence in 50% Dataset : 5

Number of Sequence in Full Dataset : 25

Average sequence length: 54.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12845	C2W846_BACCE_11_55	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12845	Q08CI3_DANRE_125_180	91.6

Sequence based PCA Plot of the family - PF12845 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay