3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02606

Details:

PFam ID : PF02606

PFam Domain Description : Tetraacyldisaccharide-1-P 4'-kinase

Number of Sequence in 50% Dataset : 201

Number of Sequence in Full Dataset : 785

Average sequence length: 305.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02606	C2SBH0_BACCE_2_49	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02606	B1ZYV9_OPITP_31_434	100

Sequence based PCA Plot of the family - PF02606 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=5 Length=8
Motif2 Start=334 Length=8
Motif3 Start=362 Length=8
Motif4 Start=36 Length=17

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay