3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF12564 Details: PFam ID : PF12564 PFam Domain Description : Type III restriction/modification enzyme methylation subunit Number of Sequence in 50% Dataset : 13 Number of Sequence in Full Dataset : 68 Average sequence length: 55.6 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF12564C2BGX1_9FIRM_36_1008.3 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF12564Q5HVE3_CAMJR_27_86100 Sequence based PCA Plot of the family - PF12564 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=19 Length=8Motif2 Start=10 Length=8Motif3 Start=1 Length=8Motif4 Start=49 Length=11 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF12564
PFam Domain Description : Type III restriction/modification enzyme methylation subunit
Number of Sequence in 50% Dataset : 13
Number of Sequence in Full Dataset : 68
Average sequence length: 55.6
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER