3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF04821

Details:

PFam ID : PF04821

PFam Domain Description : Timeless protein

Number of Sequence in 50% Dataset : 64

Number of Sequence in Full Dataset : 157

Average sequence length: 234.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF04821	C5YVZ1_SORBI_228_360	74.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF04821	B5Y4M8_PHATC_70_365	100

Sequence based PCA Plot of the family - PF04821 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=37

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay