3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13939

Details:

PFam ID : PF13939

PFam Domain Description : Toxin TisB, type I toxin-antitoxin system

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 5

Average sequence length: 22.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13939	A2BJR0_HYPBU_14_102	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13939	Q57I38_SALCH_1_28	100

Sequence based PCA Plot of the family - PF13939 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay