3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06200

Details:

PFam ID : PF06200

PFam Domain Description : tify domain

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 218

Average sequence length: 35.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06200	B9KII0_ANAMF_1_127	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06200	D6MKA5_9ASPA_1_25	100

Sequence based PCA Plot of the family - PF06200 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=18

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay