3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03950 Details: PFam ID : PF03950 PFam Domain Description : tRNA synthetases class I (E and Q), anti-codon binding domain Number of Sequence in 50% Dataset : 111 Number of Sequence in Full Dataset : 974 Average sequence length: 180.1 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF03950B3L8R5_PLAKH_735_78988.1 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF03950E5SJC0_TRISP_1_92100 Sequence based PCA Plot of the family - PF03950 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 2 motifsMotif1 Start=1 Length=27Motif2 Start=54 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF03950
PFam Domain Description : tRNA synthetases class I (E and Q), anti-codon binding domain
Number of Sequence in 50% Dataset : 111
Number of Sequence in Full Dataset : 974
Average sequence length: 180.1
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER