3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09305

Details:

PFam ID : PF09305

PFam Domain Description : TACI, cysteine-rich domain

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 10

Average sequence length: 35.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09305	Q6CAT0_YARLI_7_173	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09305	F1MU29_BOVIN_12_47	100

Sequence based PCA Plot of the family - PF09305 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay