3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13955

Details:

PFam ID : PF13955

PFam Domain Description : Toxin Fst, type I toxin-antitoxin system

Number of Sequence in 50% Dataset : 8

Number of Sequence in Full Dataset : 12

Average sequence length: 19.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13955	C5WV69_SORBI_1045_1084	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13955	B1NRV6_ENTFA_6_26	100

Sequence based PCA Plot of the family - PF13955 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay