3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09604

Details:

PFam ID : PF09604

PFam Domain Description : F subunit of K+-transporting ATPase (Potass_KdpF)

Number of Sequence in 50% Dataset : 16

Number of Sequence in Full Dataset : 136

Average sequence length: 24.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09604	D7JY77_9BACE_457_621	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09604	B5EM76_ACIF5_5_29	94.8

Sequence based PCA Plot of the family - PF09604 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay