3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07559 Details: PFam ID : PF07559 PFam Domain Description : Flagellar protein FlaF Number of Sequence in 50% Dataset : 298 Number of Sequence in Full Dataset : 690 Average sequence length: 138.5 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF07559E7NT32_TREPH_1_81No suitable BRS could be identified HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF07559D1ZXP9_SORMK_162_23897.5 Sequence based PCA Plot of the family - PF07559 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 3 motifsMotif1 Start=1 Length=8Motif2 Start=29 Length=18Motif3 Start=17 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF07559
PFam Domain Description : Flagellar protein FlaF
Number of Sequence in 50% Dataset : 298
Number of Sequence in Full Dataset : 690
Average sequence length: 138.5
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER