3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08151

Details:

PFam ID : PF08151

PFam Domain Description : FERM C-terminal PH-like domain

Number of Sequence in 50% Dataset : 18

Number of Sequence in Full Dataset : 90

Average sequence length: 70.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08151	A8QEP1_BRUMA_223_304	35.2

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08151	A0DLU1_PARTE_122_193	100

Sequence based PCA Plot of the family - PF08151 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=28
Motif2 Start=81 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay