3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF01565

Details:

PFam ID : PF01565

PFam Domain Description : FAD binding domain

Number of Sequence in 50% Dataset : 0

Number of Sequence in Full Dataset : 7161

Average sequence length: 133.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF01565	Q21JF3_SACD2_47_264	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF01565	Q6LJC7_PHOPR_16_72	28

Sequence based PCA Plot of the family - PF01565 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay