3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07664

Details:

PFam ID : PF07664

PFam Domain Description : Ferrous iron transport protein B C terminus

Number of Sequence in 50% Dataset : 30

Number of Sequence in Full Dataset : 1052

Average sequence length: 54.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07664	B9YCT3_9FIRM_421_472	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07664	Q8TVZ0_METKA_451_506	100

Sequence based PCA Plot of the family - PF07664 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=31 Length=20
Motif2 Start=3 Length=18

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay